Funes el memorioso

The data is at

/gpfs/scratch/yuy121/Bio

The program is at

/gpfs/work/yuy121

Last login: Fri Feb  1 03:11:02 2013 from *.cse.psu.edu
[yuy121@cyberstar: ~]# cd /gpfs/work/yuy121/samtools/
[yuy121@cyberstar: /gpfs/work/yuy121/samtools]# ls
AUTHORS          bam_reheader.c  faidx.c         misc
bam2bcf.c        bam_rmdup.c     faidx.h         NEWS
bam2bcf.h        bam_rmdupse.c   INSTALL         padding.c
bam2bcf_indel.c  bam_sort.c      kaln.c          phase.c
bam2depth.c      bam_stat.c      kaln.h          razf.c
bam_aux.c        bamtk.c         khash.h         razf.h
bam.c            bam_tview.c     klist.h         razip.c
bam_cat.c        bcftools        knetfile.c      sam.c
bam_color.c      bedidx.c        knetfile.h      sam.h
bam_endian.h     bgzf.c          kprobaln.c      sam_header.c
bam.h            bgzf.h          kprobaln.h      sam_header.h
bam_import.c     bgzip.c         kseq.h          sample.c
bam_index.c      ChangeLog.old   ksort.h         sample.h
bam_lpileup.c    COPYING         kstring.c       samtools
bam_mate.c       cut_target.c    kstring.h       samtools.1
bam_md.c         errmod.c        libbam.a        sam_view.c
bam_pileup.c     errmod.h        Makefile        win32
bam_plcmd.c      examples        Makefile.mingw
[yuy121@cyberstar: /gpfs/work/yuy121/samtools]# ls /gpfs/scratch/yuy121/Bio/
NA19240_GAIIx_100_chr21.bam
[yuy121@cyberstar: /gpfs/work/yuy121/samtools]# ./samtools view -H /gpfs/scratch/yuy121/Bio/NA19240_GAIIx_100_chr21.bam 
[yuy121@cyberstar: /gpfs/work/yuy121/samtools]# ./samtools view /gpfs/scratch/yuy121/Bio/NA19240_GAIIx_100_chr21.bam